Not exactly sure what you mean by a 'new server'. It's a cPanel server and they have the enterprise version running (on a trial) but they really wanted the standard version. The server / site is up and running.
Use with hosting control panel plugins not supported
so in practice, standard version won't work well (I think mainly depending on the number of Apache virtual hosts) with WHM/cPanel.
if it's a dedicated server without any control panel, that'll work (replace enterprise version with standard version), native virtual hosts number is unlimited.
I re-read your original reply (not sure how I mis-read it) and it makes sense (basically just re-install). It's a single site VPS, so standard will work fine.